Morteza's repositories
COMPARE-suite
Novel ultrafast suite for high-throughput & high-content multiparameter screening as in drug discovery. It has unique modules for QC, bias correction, similarity measurement, clustering and visualization. It can process hundreds of samples with many markers in a few hours not days & circumvents bath effect. It couples with any plate reader.
compaRe
R package with two functions for similarity measurement and clustering. It uses dynamic programming to measure spatial similarity between two datasets. It can be used to generate a similarity matrix as input to the clustering function. The clustering function reports maximal cliques as clusters and dense areas as communities.
EnrichR
R module for interacting with Enrichr
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