montmasis / S3WP

interactive HCA for S3WP

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Interactive data visaulization via hierachical cluster analysis (HCA). Original source code from: https://jokergoo.github.io/InteractiveComplexHeatmap/articles/share.html

There are two versions of the HCA, one for average values (across 6 visits) and the other for values per each single visit. In each folder:

app.R : containing R code that generates the interactive heatmap.
htShiny.RData : containing all R objects needed for heatmap (loaded in app.R.)
htShiny.sh, and htShiny.bat : these can be run in the terminal under Linux/MacOS or Windows.

An easy way to access the interactive heatmaps is to open the app.R file on R studio and run the script.
You will not need to have installed the InteractiveComplexHeatmap package, since app.R will install it automatically if not already installed.

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interactive HCA for S3WP


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