molgenis / systemsgenetics

Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool

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tabix support for CSI index

ClayBirkett opened this issue · comments

The GenotypeHarmonizer does not recognize a csi index for VCF files. This is needed for large genomes. Could this support be added?

Thank you for the suggestion. We currently have no plans to incorporate CSI.