mohanbolisetty

CellView

Simple App to visualize single cell datasets

dscam_nanopore

Dscam isoform analysis on Nanopore Data

abfio

Process axon binary files, filter and plot axon potentials

awesome-single-cell

List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.

betago

Go bots for the people

course2017

Genomics lessons for week 4 of the Microbial Diversity course at the Marine Biological Lab in Woods Hole, MA.

CREC-OpenHouse

Presentation For CREC-OpenHouse

d3-book

Sample code files to accompany the book “Interactive Data Visualization for the Web”

data_incubator

endseq

Pipeline for endseq analysis and plots

JAX-NeuroGeneticsSClDataAnalysis

JAX: Neurogenetics Short Course Single cell data analysis

JGM-CSSC

Presentation of CellView at JGM-CSSC Meeting

JGM-GenomicsResearchClub

JGM-GenomicsResearchClub

JGM-QC

QC Pipeline for NGS libraries

MEDS6498-SingleCell

Single cell biology lecture for MEDS6498

NA12878

Data and analysis for NA12878 genome on nanopore

OCT-OpenHouse

JAX-GM OpenHouse

oneliners

Useful bash one-liners for bioinformatics.

playground

Play with neural networks!

Repo-2017

Python codes in Machine Learning, NLP, Deep Learning and Reinforcement Learning

reveal.js

The HTML Presentation Framework

rnaseq_tutorial

Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.

scRNASeq-Kidney

Single Cell RNA-seq of the Kidney

SingleCellBrowser

singleCellSeq

trans-seq

Pipeline to analyze Trans-splicing

umap

Uniform Manifold Approximation and Projection