moe1619's repositories
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gatk4-germline-snps-indels
Workflows for germline short variant discovery with GATK4
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GATK_gCNV_pipeline
This repository contains scripts and resources for Copy Number Variant (CNV) analysis on and Interstitial Cystitis Cohort (n=425) using the Genome Analysis Toolkit's germline CNV (GATK-gCNV) pipeline. The GATK-gCNV pipeline could be used for other datasets.
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PharmCAT-tutorial
Tutorial materials for the PharmCAT
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pilot_qc_website
simple website for displaying multiqc output
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