mobilist

interviews

Everything you need to know to get the job.

fastai

The fastai deep learning library

fastbook

The fastai book, published as Jupyter Notebooks

pytesseract

A Python wrapper for Google Tesseract

reference-architecture

The Reference Architecture for Agility is a technology-neutral logical architecture based on a disaggregated cloud-based model.

the-coding-interview

Programming exercises, code katas and puzzles for your job interview training - or just for fun.

awesome-video

A curated list of awesome streaming video tools, frameworks, libraries, and learning resources.

CLAM

Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biomedical Engineering

elasticsearch-spark-recommender

Use Jupyter Notebooks to demonstrate how to build a Recommender with Apache Spark & Elasticsearch

NCRF

Cancer metastasis detection with neural conditional random field (NCRF)

pyvips

python binding for libvips using cffi

tifffile

Read and write TIFF files

books

The-Complete-Coding-Interview-Guide-in-Java

The Complete Coding Interview Guide in Java, published by Packt

keycloak-nodejs-example

A simply step by step Keycloak, MySQL and Node.js integration tutorial. There are some docker examples as well.

scipy-2018-sklearn

Scipy 2018 scikit-learn tutorial by Guillaume Lemaitre and Andreas Mueller

awesome-ai-cancer

Awesome artificial intelligence in cancer diagnostics and oncology

strimzi-kafka-oauth

OAuth2 support for Apache Kafka® to work with many OAuth2 authorization servers

PytorchDigitalPathology

An implementation of Unet for pytorch designed for digital pathology segmentation

MachineLearningForMedicalImages

Example code on how to apply machine learning methods to medical images. Contains code (python and python notebooks) and data (DICOM)

SSL_CR_Histo

Official code for "Self-Supervised driven Consistency Training for Annotation Efficient Histopathology Image Analysis" Published in Medical Image Analysis (MedIA) Journal, Oct, 2021.

Exact

An open source online platform for collaborative image labeling of almost everything

DigitalHistoPath

LabelSlide

LabelSlide is a slide annotation tool and label object bounding boxes in virtual slides (generally used in pathology)

openremoteslide

OpenRemoteSlide: An Extension of OpenSlide for Remote Access of Whole Slide Images

fwat

A Fast Whole-slide image Annotation Tool (FWAT) for conducting painless studies requiring annotations on whole-slide images.

qStudy

Annotation portal for medical images made using magic of 3d slicer, VNC and web apps.

cmiv-ai-course

Contains Jupyter Notebooks used during the exercise sessions at CMIVs (https://liu.se/en/research/center-for-medical-image-science-and-visualization-cmiv) AI course for radiologists and pathologists.

anonymize-slide

Delete the label from a whole-slide image

effective-java-3e-source-code

The source code from the third edition of Effective Java, with minor additions as necessary to make it runnable.