Montpellier BioInformatique pour le Diagnostic Clinique

knotAnnotSV

A simple script to create a customizable html file from an AnnotSV output.

update_annovar_db

scripts to automatically update ANNOVAR db

MPA

MoBiDiC Priorization Algorithm

MobiCNV

CNV analysis based on the depth of coverage of Illumina data

SEAL

SEAL db - Simple, Efficient And Lite database for NGS

Captain-ACHAB

Analysis Converter for Human who might Abhor Bioinformatics. A simple and useful interface to analysis of WES data for molecular diagnosis

MobiDL

MobidicWDL workflows

MobiBedAnnotator

This script will annotate a BED file with refSeq NM and exons positions

nenufaar

DNA NGS pipeline

mobidicweb

web site for mobidic group

mpaweb

Website for MPA

nenufaarityweb

ovirt_api_scripts

python script to manage oVirt from the API

spliceai

REST API for spliceai

Variant-CallerWrapped

Wrapper for Variant-Caller execution

Achabilarity

Achab In Singularity, a Singularity Container for Captain Achab (annotation workflow)

AddDB_updater

Script to update external cross reference database into a single file

BARMEN

BenchmARking from Mobidic for Exome sequencing at Nucleotide scale

Crom-wellWrapped

Wrapper for Cromwell execution

autoAchab

script to automatically launch captainAchab MobiDL WDL workflow

Dev-Singularity

Repo for singularity development and test

MDAPI

RESTful API for MobiDetails - deprecated - see MDUtils repo

MobiDL-dev

Developement of new pipeline from MobiDL

MoLLuDiC

CNV pipeline for MobiDL and Achab

oneliners

Useful bash one-liners for bioinformatics.

phenolyzer

phenotype-based prioritization of candidate genes for human diseases