Milad Miladi (mmiladi)

mmiladi

Geek Repo

Company:University of Freiburg

Home Page:bioinf.uni-freiburg.de/~miladim

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Milad Miladi's starred repositories

Bio-RNA-RNAaliSplit

Split and decompose structural RNA multiple sequence alignments

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monod

:notebook: Our cool, secure, and offline-first Markdown editor.

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pybedtools

Python wrapper -- and more -- for BEDTools (bioinformatics tools for "genome arithmetic")

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IntaRNA

Efficient target prediction incorporating accessibility of interaction sites

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applied-computational-genomics

Applied Computational Genomics Course at UU: Spring 2020

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redshift

Redshift adjusts the color temperature of your screen according to your surroundings. This may help your eyes hurt less if you are working in front of the screen at night.

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galaxytools

:microscope::books: Galaxy Tool wrappers

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docker-galaxy-stable

:whale::bar_chart::books: Docker Images tracking the stable Galaxy releases.

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GraphClust

Structural clustering of local RNA secondary structures

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github-markdown-toc

Easy TOC creation for GitHub README.md

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galaxy-rna-workbench

Galaxy RNA workbench

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GraphClust-2

A pipeline for structural clustering of RNA secondary structures

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bioconda-recipes

Conda recipes for the bioconda channel.

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dot2circ

convert a ViennaRNA dotplot to a circos base-pair link plot

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LocARNA

Alignment of RNAs

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antarna

RNA inverse folding using ant-colony optimization

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pyVienna

Collection of python functions which wrap the ViennaRNA package

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docker-recipes

:whale: Dockerfiles to build Galaxy images

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