mlin

rocksdb-cloud

A library that provides an embeddable, persistent key-value store for fast storage optimized for AWS

concurrentqueue

A fast multi-producer, multi-consumer lock-free concurrent queue for C++11

fermi-lite

Standalone C library for assembling Illumina short reads in small regions

ppx_deriving

Type-driven code generation for OCaml

genomics

Analysis of Ebola virus genomes

ocaml

some hacks

ga4gh-schemas

Models and APIs for Genomic data. RETIRED 2018-01-24

adam

ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.

samtools

PerconaFT

PerconaFT is a high-performance, transactional key-value store

mongo

TokuMX is a high-performance, concurrent, compressing, drop-in replacement engine for MongoDB | Issue tracker: https://tokutek.atlassian.net/browse/MX/ |

argweaver

Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)

pareto

GSL powered OCaml statistics library

pdf2htmlEX

Convert PDF to HTML without losing text or format.

adt.js

Algebraic data types for Javascript

matches.js

Powerful pattern matching for Javascript

implement.js

Strong type-checking for dependency injection and method arguments.

ocaml

The core OCaml system: compilers, runtime system, base libraries

parmap

Parmap is a minimalistic library allowing to exploit multicore architecture for OCaml programs with minimal modifications.

dx-toolkit

DNAnexus platform client libraries

homebrew-ocaml

brew tap for ocaml

opam-repository

Main public package repository for opam, the source package manager of OCaml.

CDE

CDE: Code, Data, and Environment packaging for Linux

ocaml-cohttp

Very lightweight HTTP server using Lwt

release

A multi-process daemon framework for OCaml

opam

opam is a source-based package manager. It supports multiple simultaneous compiler installations, flexible package constraints, and a Git-friendly development workflow.

mlin-ocaml-genomics

Mike Lin's OCaml Genomics library

knox

S3 Lib

ocamlllvm

A variant of OCaml's native code compiler ocamlopt using LLVM in the back-end for optimization and code generation. Warning: Binaries produced by this compiler are in no way compatible with binaries produced by ocamlopt.

karait

A ridiculously simple queuing system, with clients in various languages, built on top of MongoDB.