Beast code in Giters

Morgan Langille's repositories

MicrobeDB

Provides a local database of in-house and published genomes for Bacteria and Archaea from NCBI

Language:PerlGPL-3.024 2 7

biotorrents

A BitTorrent tracker for legal open sharing of scientific data

Language:PHPGPL-2.015 4 11

get_mgrast_data

Scripts that allow easy retrieval of information from the MG-RAST API

Language:Perl2 3 2

biom-format

The Biological Observation Matrix (BIOM) Format Project

Language:PythonNOASSERTION1 20

gengis-rca-plugin

A reference condition analysis plugin for GenGIS

Language:R1 3 7

mlangill.github.com

Repository for Morgan Langille's personal web page.

Language:HTML1 30

picrust

Phylogenetic Investigation of Communities by Reconstruction of Unobserved STates (PICRUST): Official repository for software and unit tests

Language:PythonGPL-3.01 20

qiime

Quantitative Insights Into Microbial Ecology (QIIME): Official repository for software and unit tests

Language:PythonGPL-2.01 20

STAMP

Statistical Analysis of Metagenomic Profiles

Language:PythonGPL-3.01 20

bioinformatics-ca.github.io

repository for student workshop pages

Language:HTML020

imr

Integrated Microbiome Resource

020

laravel

A PHP Framework For Web Artisans

Language:PHP020

metAMOS

A metagenomic assembly pipeline for AMOS

Language:Assembly020

minimal-mistakes

A responsive Jekyll theme with large full page images and clean typography.

Language:CSSGPL-2.0020

PhyloSift

Phylogenetic and taxonomic analysis for genomes and metagenomes

Language:Perl020

shiny-phyloseq

An interactive web application for demonstrating and using phyloseq.

Language:RGPL-3.0020

test_storage

test

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vermillion

A bioinformatics package for the processing of targeted DNA sequencing to discover novel endogenous retroviruses.

Language:Python020

VirFinder

VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data

Language:R020