mkinnaman's repositories
Canopy
Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing.
Language:RGPL-2.0000
deconstructSigs
deconstructSigs
Language:R000
machina
Framework for Metastatic And Clonal History INtegrative Analysis
Language:Jupyter NotebookBSD-3-Clause000
R2CPCT
Workflow for processing and analyzing whole genome sequencing (WGS) from the HMF.
Language:RGPL-3.0000
soap-hla
SOAP-HLA is a flow of sequencing data analysis pipeline to type all of the HLA genes in IMGT/HLA database using capture sequenced data or WGS data with high accuracy.
Language:Perl000
superFreq
Analysis pipeline for cancer exomes
Language:RMIT000
SVclone
A computational method for inferring the cancer cell fraction of tumour structural variation from whole-genome sequencing data.
Language:PythonBSD-3-Clause000