mjakobs

CIrobustLMM

Contain R script to calculate percentile confidence intervals based on bootstrap for robust linear mixed models

PowerAnalysisForSpatialOmics

AmplificationTimeR

Code for timing amplifications

scflow

Please consider using/contributing to https://github.com/nf-core/scdownstream

scrnaseq

A single-cell RNAseq pipeline for 10X genomics data

nanoseq

Nanopore demultiplexing, QC and alignment pipeline

nanostring

An analysis pipeline for Nanostring nCounter expression data.

spatialvi

Pipeline for processing spatially-resolved gene counts with spatial coordinates and image data. Designed for 10x Genomics Visium transcriptomics.

rawr

rawr package

hugo-blox-builder

🚨 GROW YOUR AUDIENCE WITH HUGOBLOX! 🚀 HugoBlox is an easy, fast no-code website builder for researchers, entrepreneurs, data scientists, and developers. Build stunning sites in minutes. 适合研究人员、企业家、数据科学家和开发者的简单快速无代码网站构建器。用拖放功能、可定制模板和内置SEO工具快速创建精美网站！

rascal

R package and Shiny app providing functions for scaling relative copy number to absolute values for shallow whole genome sequencing of cancer samples.

singularity-deploy

Build and deploy Singularity containers to GitHub releases, and pull with the singularity-hpc client

SECNVs

A tool for simulating CNVs for WES data. It simulates rearranged genome(s), short reads (fastq) and BAM file(s) automatically in one single command.

sanger_wgs

NGS_Preprocessing_Pipeline

NGS Pipelines for Preprocessing RNA-seq, Whole Genome Sequencing and Exome-seq, and miRNA-Seq Data