miykael

3dprintyourbrain

How to 3D print your brain from a T1 MRI image.

nipype_tutorial

Learn Nipype with these tutorial notebooks - go here to see them online -->

gif_your_nifti

How to create fancy GIFs from an MRI brain image

atlasreader

Python interface for generating coordinate tables and region labels from statistical MRI images

fmriflows

fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st and 2nd-level analysis, as well as multivariate pattern analysis.

workshop_pybrain

miykael.github.io

Repo for my personal page: https://miykael.github.io/

nipype-beginner-s-guide

Beginner's guide for Nipype

parcellation_fragmenter

Fragments FreeSurfer parcellation annotation in N-equal sized parcels

noah_ages

Contains the code to create a fun gif in which Noah Kalina ages 20 years in 20 seconds.

traffic_info_github

Script to track github traffic (views and clones) over period of 14 days

wallpaper_clouded_globe

This script generates a satellite image from the whole planet (with cloud coverage) from https://worldview.earthdata.nasa.gov that than can be used as a wallpaper

LINEViewer

Python based EEG analysis tool that provides a rough data overview

miykael

model-optimization

A toolkit to optimize ML models for deployment for Keras and TensorFlow, including quantization and pruning.

scikit-learn-mooc

scikit-learn-mooc

temporal_binding_window

These matlab scripts compute the temporal binding window (TBW) for a group of subject that participated in a behavioral multisensory integration study

workshop_ino_03

Innovation workshop

xbar_screentime_tracker

Passive tracking of time spent in front of your screen (optimized for Mac OS X)

binder

Binder metapackage for usage, docs, and chat

boy_ages

journal_club_uab

Slides and Notebooks used for the Neuroimaging Journal Club at UAB in March 2020

kaggle_trends_challenge

Notebooks containing my solution for the TReNDS Neuroimaging challenge on Kaggle

keras-io

Keras documentation, hosted live at keras.io

mybinder_pybrain

Repository to provide framework to run workshop_pybrain on mybinder

nbviewer

nbconvert as a web service: Render Jupyter Notebooks as static web pages

pybrain-workshop.github.io

website

the_longest_way

This repo contains scripts to realign portrait photos and create nice videos for "The Longest Way" project from Christoph Rehage

workshop_marburg

Materials (slides, notebooks, Dockerfile) for a two day workshop focusing on the utilization of python for neuroimaging.

xbar_deltatime_tracker

Bitbar application to track time between two terminal command / shortcuts - i.e. simple stopwatch