miso-lims / walkthroughs

Walkthroughs for common MISO tasks

MISO OICR Documentation and workshop

Home of the training documents for the miso-lims laboratory information management system for the Ontario Institute for Cancer Research (OICR).

• Training Workshop

This tutorial leads users through the steps required to enter data in MISO. Users may complete all sections of the tutorial, or just the sections which apply to their lab tasks.

Fork

To configure this document for your own MISO training, first fork this repo. You can rename it if you like.

Then, update the _config.yml file, replacing site-specific values.

Finally, deploy the tutorial to GitHub Pages or elsewhere.

Build

Requirements:

• Ruby 2.x
• Bundler
• Jekyll

Build:

bundle install

On MacOS, Bundler may fail to install libv8. To work around this, you can install v8-315 using Homebrew (or otherwise) and then install the dependencies that use it using the following before trying bundle install again.

gem install libv8 -v '3.16.14.19' -- --with-system-v8
gem install therubyracer -v '0.12.3' -- --with-v8-dir=/usr/local/opt/v8@3.15

Run

bundle exec jekyll serve