mireia-bioinfo

pipelineNGS

Pipeline for processing epigenomic NGS data.

workshop_ggplot2

📈📊 Presentation and materials for a ggplot2 workshop (estimated time: 1h 30min).

howto-thesis-bookdown

How to survive writting your PhD thesis using R and {bookdown}.

maRge

maRge is a package developed for simplifying motif analysis of genomic regions.

phdthesis_code

🖥️📚 WorkflowR site containing code and analyses produced throghout my PhD thesis.

meowmics

R package with several functions for performing fancatstic analyses on epigenomic data.

Single-cell-RNA-seq-data-analysis-2018

Event page: https://www.csc.fi/web/training/-/single-cell-rnaseq-r-2018

workshop_bioinfo_ChIPseq

🖥️🧬 Materials for a Bioinformatics Workshop on ChIP-seq analysis, introduction to R and GenomicRanges.

plotRegulome

R package for plotting Islet Regulome data.

2017-09-27_rladiesBCN-meetup-ggplot2

Slides for the R-Ladies Meetup about ggplot2 (27th September 2017).

2019-02-13_rladiesBCN_relaunch

Slides and materials for the R-Ladies Barcelona relaunch meetup event

biorants-blog

Code for my personal blog, created with R package blogdown.

CRCmapper

CRCmapper: map core regulatory circuitry

CV

CYT_hub

test

enrichPFAM

Gene ontology enrichment analysis using human genes in a PFAM ID vs another organism genome.

hex-stickers

RStudio hex stickers

IRB_hub

UCSC Track Hub for the Islet Regulome Browser

lecture6

lecture7

mouseSim

Usinga PFAM ID as input, selects all human genes and returns mouse genes anotated to the same GO terms.

OncoProstApp

R web-app for expression analysis in prostate cancer.

PIRB_deployment

PIRB_shinyApp

Code for the Shiny framework for the Islet Regulome Browser.

practical7

practical8

purrfectTemplates

Collection of Rmarkdown templates for different projects and types of documents.

seminar4

tvseries

IMBDb TV series R data package

xaringan_gh