mirams

Gary Mirams's repositories

PyHillFit

Code to load and fit dose response curves in a Bayesian inference framework

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sine-wave

Code for training and validation of ion channel models fitted to sine-wave based voltage clamp data

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ephys-reading-help

To make reading easier for modellers. It's not an encyclopedia.

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ap-nimbus-client

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BDA_course_Aalto

Bayesian Data Analysis course at Aalto

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boot-camps

Software Carpentry boot camp material

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cardiomyocyte_emulator

Python package of our emulator according to "Neural network emulation of the human ventricular cardiomyocyte action potential: a tool for more efficient computation in pharmacological studies"

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chaste-docker

Dockerfiles for Chaste

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chaste-project

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ephys-protocols

A collection of the latest versions of our voltage-clamp protocols for characterising ion channel kinetics rapidly and accurately with mathematical models

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exitwp

Exitwp is tool primarily aimed for making migration from one or more wordpress blogs to the jekyll blog engine as easy as possible.

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hergModels

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hERGRapidCharacterisation

Rapid characterisation of hERG channel kinetics

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libcellml

This is Gary's copy of libCellML

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libcmaes

libcmaes is a multithreaded C++11 library with Python bindings for high performance blackbox stochastic optimization using the CMA-ES algorithm for Covariance Matrix Adaptation Evolution Strategy

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