Michael Innerberger's repositories
HackBrno23_introIntoImglib2AndBDV
Collection of example and try-yourself pieces of code to get familiar with ImgLib2 and BDV
imglib2
A generic next-generation Java library for image processing
imglib2-algorithm-gpl
Image processing algorithms for ImgLib2 (GPL-licensed)
imglib2-playground
Fork of the I2K tutorials for imglib2. Includes partial solutions to tasks and an implementation of an anisotropic-diffusion denoiser.
mpicbg
Fiji module for image transformation and related algorithms
n5
Not HDF5
n5-hdf5
Best effort N5 implementation on HDF5 files (despite the irony).
n5-zarr
Zarr filesystem backend for N5
ngff
Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.
staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
stim-feedstock
A conda-smithy repository for stim.
stitching-spark
Reconstruct big images from overlapping tiled images on a Spark cluster.