Microscope Pony's repositories
bio-formats-matlab
**Experimental** Bio-Formats Matlab and GNU Octave bindings
idr0083-sars-cov2-notebook
An example of reading a 13 gigapixel SARS-CoV-2 image (around 27 GB on disk) in Jupyter using Zarr
omero-mapr-graphql
Query OMERO.mapr IDR metadata using GraphQL
conda-omero-web
OMERO.web Conda package
jupyter-omero-authenticator
Use OMERO to authenticate with JupyterHub
omero-oauth
OMERO.web application to allow OAuth2 login to OMERO
omero-server-setup
Create, initialise and upgrade OMERO databases
staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
bio-formats-bundles
**Experimental** Distribution bundles for bio-formats releases
bio-formats-imagej
**Experimental** Bio-Formats ImageJ plugin for image import and export
bio-formats-test
**Experimental** Bio-Formats integration tests
bio-formats-tools
**Experimental** Bio-Formats command line tools
conda-django-pipeline
A Conda package for django-pipeline for use with OMERO.web
conda-omero-dropbox
A Conda package for OMERO.dropbox
conda-omero-marshal
A Conda package for OMERO.marshal.
conda-omero-server
A Conda package for OMERO.server.
conda-omero-server-setup
OMERO.server setup and database management Conda package
conda-whitenoise
A conda-smithy repository for whitenoise.
conda-zeroc-ice-bin
Zeroc Ice conda package with binaries and jars for OMERO
conda-zeroc-ice36
zeroc-ice Conda package for OMERO
fs-omero-pyfs
OMERO PyFilesystem2 implementation
idr-count-publications
Which journals are most published in the IDR?
idr-release-stats
Plot IDR release stats
idr-upload-js-s3-explorer
AWS JavaScript S3 Explorer is a JavaScript application that uses AWS's JavaScript SDK and S3 APIs to make the contents of an S3 bucket easy to browse via a web browser.
idr0015-tara-oceans-geospatial
This notebook shows how to plot geospatial metadata attached to the samples gathered by the Tara Oceans project.
omero-asyncio
Python asyncio OMERO client
omero-cli-database
OMERO server database management plugin
omero-cli-externalconfig
OMERO server external configuration plugin