Supplementary code for "Modular Dynamic Biomolecular Modelling: The Unification of Stoichiometry, Thermodynamics, Kinetics and Data."
The nbviewer links will display the notebooks containing the code for each of the examples. These notebooks can be interactively run online using the Binder links.
| Notebook | nbviewer | Binder | |
|---|---|---|---|
| 3.1. Glycolysis & Pentose Phosphate pathway | |
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| 3.2. Respiration | |
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| 4. Dynamic Modelling and Parameter Estimation | |
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