mgxd

ci-info

gather continuous integration information on the fly

nibabies

Processing tools for magnetic resonance images of infant brains

BIDS2NDA

A conversion tool for creating NDA compatible metadata representation from BIDS datasets.

dipact

etelemetry-client

Etelemetry client

etelemetry-server

ET phones home

fmriprep

fMRIprep is a functional magnetic resonance image pre-processing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to differences in scan acquisition protocols and that requires minimal user input, while providing easily interpretable and comprehensive error and output reporting.

heudiconv-joss-paper

Repository to prepare HeuDiConv paper

ismrm-nibabies

MCRIBS_for_MAKEGI

Having to do a re-build of the docker image which we use for this, making an additionally git repo to track changes.

migas

migas-py

migas-server

mriqc

Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain

nibabel

Python package to access a cacophony of neuro-imaging file formats

nilearn

Machine learning for NeuroImaging in Python

nipype

Workflows and interfaces for neuroimaging packages

nipype_tutorial

Learn Nipype with these tutorial notebooks - go here to see them online -->

nireports

The NiPreps' Reporting and Visualization system - report templates and "reportlets"

nitransforms

a standalone fork of nipy/nibabel#656

niworkflows

Common workflows for MRI (anatomical, functional, diffusion, etc)

openneuro

A free and open platform for analyzing and sharing neuroimaging data

poldracklab.github.io

Poldracklab guide

pybids

Python package to access BIDS datasets

pydra

a new engine

python-client

A python client to query TemplateFlow via pyBIDS

sdcflows

Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes

smriprep

Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcesssing tools)

surfplot

A package for publication-ready brain surface figures

wslink

Python/JavaScript library for communicating over WebSocket