mdrasmus

keepnote

Note-taking and organization app

argweaver

Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)

keepnote-extensions

Extensions for KeepNote - note-taking and organization

compbio

Python libraries and utilities for computational biology

boxcutter

Simple command-line driven screenshot program for Windows

summon

visualization prototyping and scripting

dlcoal

Modeling gene duplication, loss, and coalescence

rpy

R inferface for Python

spimap

Species informed maximum a posteriori gene tree reconstruction

familinx

Simple ORM for familinx database

mashome

Genome Browser Mashup library

batchqueue

batchqueue - a set of scripts for working with batch queues

bitstarter

dalliance

Interactive web-based genome browser.

rangehttpserver

Python module that implements a simple HTTP server that understands the HTTP Range header.

smc-analysis

Analysis of sequential markov coalescent

spark-examples

Playing around

summonjs

A visualization prototyping library for javascript

tot

Total Recall program tracing tool.

viewbam

Simple JS client-only BAM viewer