Marshall Brown's repositories
runningMaps
heatmaps of running routes with STRAVA data
TreatmentSelection
a suite of descriptive and inferential methods designed to evaluate individual treatment selection markers
partlyconditional
R package to fit partly conditional Cox and logistic models
SISCR-Data-Files
Data files for the 2017 SISCR Course Discovering and Evaluating Biomarkers for Guiding Treatment: Methodology for Precision Medicine
survAccuracyMeasures
estimate accuracy measures for risk prediction markers from survival data
AIPWmeasures
Estimate measures of predictive accuracy using augmented inverse probability weights for two-phase biomarker validation studies
cv
I didn't leave anything out, I may have added some stuff
HarvardDataScience
Official content for Harvard CS109
InterimMonitoring
study the effects of interim monitoring on inference for treatment selection biomarkers
longsurvAccuracyMeasures
R package to evaluate partlyconditional models
LPythonTHW
Learn python the hard way exercises
mdbrown.github.io
personal website for github projects
musicReco
song recommendations using the MSD taste profile subset
PowerSAM_sims
simulation study to learn more about the performance of PowerSAM
RcppGlimmerEx
Example of running code that utilizes Rcpp on glimmer
rmarkdown-website-examples
Examples of R Markdown Websites
SISCR_2015_module7
Data and Code for examples in 2015 SISCR.
survCompetingRisk
evaluate the prognostic accuracy of a marker with multiple competing risk events
survMarkerTwoPhase
Evaluate the prognostic accuracy of a marker under two phase designs.
survRpackages
Prospective bio-marker validation with survival data
SurvTreatmentSelection
First thoughts on expanding TreatmentSelection to incorporate time-to-event data
tableViz
visualizations for tables
twitclouds
learning about twitteR by making wordclouds with tweet data
xgboost
Large-scale and Distributed Gradient Boosting (GBDT, GBRT or GBM) Library, on single node, hadoop yarn and more.