Marek Cmero's repositories
labarchives-py
A python wrapper for interacting with the LabArchives API.
SVclone_Rmarkdown
Generate plots and tables from the SVclone paper and supplementary
mcmero.github.io
My personal site.
sv_simu_pipe
Simulate SVs at different purity levels.
bioconda-recipes
Conda recipes for the bioconda channel.
ccube-analysis
Results from ccube analyses in R markdown
perfect_phylogeny
An implementation of the perfect phylogeny and incomplete phylogeny algorithms, for building and inferring phylogenetic trees.
python-novice-inflammation
Software Carpentry introduction to Python for novices using inflammation data.
Socrates
Socrates: Identification of genomic rearrangements in tumour genomes by re-aligning soft clipped reads
sv_tools
A few tools for plotting and reasoning about genomic structural variants.
TextualRealityExperienceEngine
Textual Reality Experience Engine : Text Adventure Game Engine
workflow-template-nextflow
Template for building a small workflow in Nextflow