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mchen-caris's repositories

One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification

Language:PythonGPL-3.0000

Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biomedical Engineering

Language:PythonGPL-3.0000

Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)

Language:Jupyter NotebookMIT000

Blazing fast nuclei segmentation for brightfield Whole Slide Images

Language:PythonBSD-3-Clause-Clear000

source code of Inter-MIL: self-interactive multi-instance learning

Language:Python000

Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications

Language:Jupyter NotebookNOASSERTION000

Tools to build deep learning pipelines.

Language:PythonMIT000

Language:Python000

Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024

Language:Jupyter Notebook000

Language:PythonNOASSERTION000

GPL-3.0000

Graph attention-based fusion of pathology images and gene expression for prediction of cancer survival

MIT000

TransMIL: Transformer based Correlated Multiple Instance Learning for Whole Slide Image Classification

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GPL-3.0000