mbourgey's repositories

EBI_cancer_workshop_visualization

EBI cancer workshop course materials

EBI_cancer_workshop_CNV

hands-on for NGS/SNParray CNV call trainning

scRNA_GBM

analysis script for GBM single cell RNA seq data

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Concordia_Workshop_Biopython

Pratical to learn basic Biopython usage

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Workshops

Workshop material

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Kyoto_DNAseq_workshop

partical session introducing MUGQIC DNAseq pipeline

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CBW_HTseq_module4

CBW HT-seq workshop module 4 on SNV calling

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CBW_HTseq_module5

CBW HT-seq workshop module 5 on SV variants calling

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CBW_BFX_GENOMIC_MEDECINE_module2

workshop for bioinformatics.ca Bioinformatics for genomics medecine Module 2

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CBW_HTseq_module3

CBW HT-seq workshop module 2 on alignment

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biohackathon_mutations

Mutation calling for biohackathon

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bioinformatics-ca.github.io

repository for student workshop pages

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bwa

Burrow-Wheeler Aligner for pairwise alignment between DNA sequences

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CBW_BFX_GENOMIC_MEDECINE_module3

CBW Bionformatics on Genomics Medecine workshop module 3 on SNV calling

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FALCON

FALCON: experimental PacBio diploid assembler

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gemini

a lightweight db framework for disease and population genetics.

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GenPipes

GenPipes Read the Docs repository

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svaba

Structural variation and indel detection by local assembly

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