mayurcybercz / surgicalsite_infection_minimization

Minimizing Deep Incisional and Organ/Space Surgical site infections (SSIs) in California acute care hospitals using Predictive risk analysis

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surgicalsite_infection_minimization

Minimizing Deep Incisional and Organ/Space Surgical site infections (SSIs) in California acute care hospitals using Predictive risk analysis

Requirements

Python 3 and Anaconda and Jupyter notebook

conda install missingno imblearn

(Most of the libraries should already be present in anaconda distribution)

Dataset

uploaded on google drive (access from link below)

https://drive.google.com/drive/folders/1f9fEMnXEKTqefRss5xLkt_oEIF1GbZUm?usp=sharing

Notebooks

There are a total of 4 Jupyter Notebooks. sepsis_data_handling is data cleaning notebook. sepsis_rf_sample is the random forest model on sample data. sepsis_rf is the random forest model with half of dataset size. sepsis_smote_fs is random forest model with smote class balancing and feature selection.

data_baseline.pickle contains the clean train,val,test data

Publication link

https://scholarworks.csun.edu/handle/10211.3/224642

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Minimizing Deep Incisional and Organ/Space Surgical site infections (SSIs) in California acute care hospitals using Predictive risk analysis


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