Luiz Max Carvalho's repositories
Statistical_Inference_BSc
Course materials for Statistical Inference ("Inferência Estatística")
stats_modelling
Resources for Statistical Modelling ("Modelagem Estatística").
Computational_Statistics
Course materials for Computational Statistics, PhD course at EMAp.
BayesianStatisticsCourse
PhD-level course at [EMAp](https://emap.fgv.br/en)
Statistical_Inference_MSc
Course materials for [Statistical Inference](https://emap.fgv.br/disciplina/inferencia-estatistica)
R0_uncertainty
Some remarks on prior modelling for the basic reproductive number in the Susceptible-Infected-Recovered (SIR) epidemic model
A2_StatMod_2023
Aggregator for the final reports on Statistical Modelling (FGV EMAp 2023/2)
ML_phylogenetics
Collection of resources on Machine Learning for Phylogenetics
Statistical_Phylogenetics_resources
So you want to learn Statistical Phylogenetics?
computing_applied_bayes
Some notes and resources on computing techniques for Applied Bayesian Modelling
Student_projects
A collection of open research projects
propriety_power_priors
On the propriety of the power prior for general models
phylogenetic_MH
Metropolis-Hastings-type sampling of phylogenetic distributions
presentations
Presentations I have given
BinaryMarkovChains
Code to fit and explore two-state discrete-time Markov Chains (DTMCs)
cladeCorrelation
Code for calculating correlations between clade indicators.
covid_model
My edits to the the model in Kubinec et al.
fluxo_urbano
Análise de rotas e fluxo urbano na RMRJ
HPD_estimation
Estimating highest posterior density regions with confidence from MCMC
IS4Mixtures
Importance sampling for (log-linear) mixtures
PhyloMarkovChains
Routines for studying tree-valued Markov chains
size-genetic-clusters
Code and data for "Estimating the reproduction number and transmission heterogeneity from the size distribution of clusters of identical pathogen sequences"
stan_summer
stan code to use adaptive infinite summation. infiniteAdaptive.stan can be downloaded and used as in the COMP_normalizing.stan example.
TreeLumpability
Studying lumpability of tree-valued Markov chains