maurya-anand

ARA

ARA.v1.6.0

getBamDepth

A script to report depth of coverage from BAM/SAM/CRAM file or parse the output generated from "samtools depth"

coursera.cicd.lab

Making Data Science Work for Clinical Reporting: CI/CD Lab

liftover

Convert genomic coordinates from the Human Genome version 19 (hg19) to version 38 (hg38)

nf-varcall

A Nextflow pipeline for variant calling and annotation using PacBio Hi-Fi sequencing reads.

perl-utils

wdl-qc

Fastq file QC and trimming using WDL

cv

docker-images

GeneFEAST

GeneFEAST is a gene-centric functional enrichment analysis summarisation and visualisation tool implemented in Python.

gh-codespaces

My clone repository

gh-custom-action-aws-deploy

A custom GitHub Action to deploy a static website to an S3 bucket.

httpd-cgi-bin

A template project for a containerized CGI web applications.

jupyter-docker

liftover-web-django

make-pipeline

Variant calling pipeline for Pacbio Hifi reads

maurya-anand

nf-long-read-seq-analysis

nf_custom_utils

py-list-packages

List the installed packages and their dependencies

pyshiny-workshop

react-django-docker

resume

rstudio-spatial-omics

sib-ml-notebooks

sra-annotator

A command-line tool for retrieving annotations from the NCBI SRA.

taipy_classifier_web_app

simple machine learning image classifier GUI app for beginners

targets-R-pipeline

terra-utils

vcf2maf

Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms