SimBio-repressilator
An implementation of the repressilator model described in: Elowitz, Michael B., and Stanislas Leibler. “A Synthetic Oscillatory Network of Transcriptional Regulators.” Nature 403, no. 6767 (January 2000): 335–38. https://doi.org/10.1038/35002125.
Installation
From PyPI:
pip install simbio-repressilator
or, from GitHub:
pip install git+https://github.com/maurosilber/simbio-repressilator
Reproduce figures
To reproduce figure 1c:
python -m simbio.models.repressilator.figures.1c