Matthew Willman's repositories
wheat-te-annotation
This pipeline uses repeatmasker, repeatmodeler, and the TREP database (https://trep-db.uzh.ch/) to annotate and mask transposable elements (TEs) in a wheat genome assembly.
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wheat-assembly
The repository contains scripts for wheat genome assembly of PacBio CCS reads.
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scripts
The repository contains helpful scripts for bioinformatics.
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