Matteo Mancini's repositories
neurosnippets
Repository for NeuroSnippets Code.
trampolino
TRAMPOLINO (TRActography Meta-Pipeline cOmmand LINe tOol) is a CLI for brain tractography. It leverages Nipype to offer an immediate way to reconstruct an orientation distribution function, use it to track the streamlines and eventually filter them, all using existing software toolboxes.
covid19ita-dash
Dashboard for monitoring COVID-19 spread in Italy using Python and Dash.
myelin-meta-analysis
Code for the Elife paper "An interactive meta-analysis of MRI biomarkers of myelin".
dissecting-conduction-delays
Code from: Dissecting whole-brain conduction delays through MRI microstructural measures
GiraffeTools
a Graphical Interface for Reproducible Analysis oF workFlow Experiments
hugo-theme-m10c
A minimalistic (m10c) blog theme for Hugo
matteomancini.github.io
My blog, NeuroSnippets!
microsuite
A collection of Dockerfiles to run several microstructural MRI tools.
mrtrix3
MRtrix provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), probabilistic tractography, track-density imaging, and apparent fibre density
NetworkModel_Toolbox
Code to run dynamical simulations on a Kuramoto Network Model of Coupled Phase Oscillators with Time Delays and visualize the results.
neurosnippets-hugo-blog
Repository for Neurosnippets Hugo Blog
nipype
Workflows and interfaces for neuroimaging packages
ossig
Website for the OHBM Open Science Special Interest Group
pytorch-CycleGAN-and-pix2pix
Image-to-image translation in PyTorch (e.g., horse2zebra, edges2cats, and more)
qmenta-sdk-example-irontract-challenge
An example of a QMENTA-compatible tool with all the required files to build and test it.
qMRLab
Quantitative Magnetic Resonance Imaging Made Easy with qMRLab: a Software for Data Simulation, Analysis and Visualization
SaltAndPepper
A general structure for deep learning on signals/spectra with PyTorch
SANDI-Matlab-Toolbox-Latest-Release
The latest release of the SANDI Matlab Toolbox
SirenMRI
Official implementation of "Lossy compression of multidimensional medical images using sinusoidal activation networks: an evaluation study"
sparkle
Sparkle Online Event Platform
spm12
Public Releases of SPM12 - see https://github.com/spm/spm for the Development Version