matteoferla / EV-D68-3C-protease

Follow-up suggestions for EV-D68 3C protease fragment-based drug-discovery campaign of ASAP consortium

Geek Repo:Geek Repo

Github PK Tool:Github PK Tool

EV-D68-3C-protease

Follow-up suggestions for EV-D68 3C protease fragment-based drug-discovery campaign of ASAP consortium.

Pipeline name Enterovirus D68 3C protease: https://asapdiscovery.org/pipeline/ Family: Picornaviridae Targeting details: https://www.notion.so/asapdiscovery/Targeting-Opportunity-Enterovirus-3C-protease-A71-89ebfbb23d4d47f6848ecabc432fed17 XChem data: https://fragalysis.diamond.ac.uk/viewer/react/preview/target/D68EV3CPROA

Three rounds were performed of the first round. First round in old folder —includes pptx, pse etc etc. Iter3 is a terse datadump of the third round. Raw data file:

  • _mergers are the merged compounds (panda pickled dataframes)
  • _analogues are the analogues from catalogue via NextMove SmallWorld (http://sw.docking.org)
  • _placements are the placed (~ docked) analogues

In these the column outcome when acceptable is used.

pipeline

About

Follow-up suggestions for EV-D68 3C protease fragment-based drug-discovery campaign of ASAP consortium

License:MIT License


Languages

Language:Jupyter Notebook 100.0%Language:Shell 0.0%