masikol

Maksim Sikolenko's repositories

Toolkit for binning FASTA, FASTQ and FAST5 files according to taxonomic annotation

Language:PythonGPL-3.04 1 1

Tool for detecting adjacent contigs and calculating LQ-coefficient

Language:PythonGPL-3.0100

Preprocessing of raw reads obtained using ARTIC's protocol for sequencing SARS-CoV-2 genome.

Language:Python1 10

Tools for creation and maintaining of RiboGrove database

Language:Python1 10

In-house pipeline for preprocessing 16S amplicon reads.

Language:R000

16sPIP: A Comprehensive Analysis Pipeline for Rapid Pathogen Detection in Clinical Samples Based on 16S Metagenomic Sequencing

Language:Perl000

Miscellaneous bioinformatic tools from the Center of Analytical and Genetic Engineering Research

Language:Python000

The program annotates low-coverage regions of sequences in fasta format

Language:PythonGPL-3.0000

The data analysis labs performed by Maxim Sikolenko and Anton Khlebko

Language:Python010

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Preprocessing for 16S rDNA Illumina reads

Language:Python010

A pipeline for determining sequences of genomes from overlapping amplicon data

Language:Python000