Martin Cech's repositories
galaxy
Data intensive science for everyone.
kent
UCSC Genome Browser source tree. Stable branch: "beta".
usegalaxy-tools
usegalaxy.* common tools
planemo
Command-line utilities to assist in developing tools for the Galaxy project.
galaxy-hub
Galaxy project website, aka Galaxy Community Hub
vue-test-utils
Component Test Utils for Vue 2
training-material
A collection of training material from offered Galaxy courses
public-galaxy-servers
Machine readable list of public Galaxy servers & utilities, visualized:
tools-iuc
Tool Shed repositories maintained and developed by the Intergalactic Utilities Commission
bioconda-recipes
Conda recipes for the bioconda channel.
usegalaxy-playbook
Ansible Playbook for usegalaxy.org
edu
BioContainers Documentation.
galaxytools-fabio
Galaxy tool wrappers
infrastructure-playbook-1
Ansible playbook for managing UseGalaxy.eu infrastructure. For the playbook managing Galaxy itself, see https://github.com/galaxyproject/usegalaxy-playbook/
galaxy-test-data
Test data files used by Galaxy.
readthedocs.org
The source code that powers readthedocs.org
biovis-report-example
An example for BioVisReport
UZIS_COVID_DATA
Rok utajované reporty ÚZIS, zasílané pouze politikům a některým státním úředníkům prof. Duškem.
recetox-xMSannotator
This is a custom adaptation of the original version of xMSannotator. It is a complete rewrite of the original functionality, following the same program structure.
RIAssigner
RIAssigner is a python tool for retention index (RI) computation for GC-MS data.
pulsar
Distributed job execution application built for Galaxy
pyMSPannotator
Repository for tool that adds more annotations (e.g. SMILES, InChI, CAS number) to MSP files (Python version).
multi-package-containers
Testing building mulled containers for multi-requirement tools.