Mark D. Longo's starred repositories

radiology-report-clustering

This project aims to cluster de-identified radiology reports based on their similarity. Report similarity is defined in terms of their clinical findings.

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RadFM

The official code for "Towards Generalist Foundation Model for Radiology by Leveraging Web-scale 2D&3D Medical Data".

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Viewers

OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages

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AutoGPT

AutoGPT is the vision of accessible AI for everyone, to use and to build on. Our mission is to provide the tools, so that you can focus on what matters.

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langchain

๐Ÿฆœ๐Ÿ”— Build context-aware reasoning applications

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llama_index

LlamaIndex is a data framework for your LLM applications

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chatgpt-retrieval-plugin

The ChatGPT Retrieval Plugin lets you easily find personal or work documents by asking questions in natural language.

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pydub

Manipulate audio with a simple and easy high level interface

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whisper.cpp

Port of OpenAI's Whisper model in C/C++

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whisper

Robust Speech Recognition via Large-Scale Weak Supervision

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medigan

medigan - A Python Library of Pretrained Generative Models for Medical Image Synthesis

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Gramformer

A framework for detecting, highlighting and correcting grammatical errors on natural language text. Created by Prithiviraj Damodaran. Open to pull requests and other forms of collaboration.

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TotalSegmentator

Tool for robust segmentation of >100 important anatomical structures in CT and MR images

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SlicerTotalSegmentator

Fully automatic total body segmentation in 3D Slicer using "TotalSegmentator" AI model

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NeMo

A scalable generative AI framework built for researchers and developers working on Large Language Models, Multimodal, and Speech AI (Automatic Speech Recognition and Text-to-Speech)

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owl2lpg

Specification of a mapping between OWL and labeled property graphs

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MONAI

AI Toolkit for Healthcare Imaging

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brainchop

Brainchop: In-browser 3D MRI rendering and segmentation

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pyRDF2Vec

๐Ÿ Python Implementation and Extension of RDF2Vec

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acr_assist_modules

ACR Assist is a clinical decision support framework designed to provide structured clinical guidance to radiologists in a manner that allows this content to be incorporated naturally into the radiology workflow.

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pykeen

๐Ÿค– A Python library for learning and evaluating knowledge graph embeddings

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gpt3_radreports

Translate radiology reports from clinical to lay text

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philter-ucsf

Open source clinical text de-identification

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philter_ucsf

clinical free text de-identification software

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wacom-driver-fix

Fixes the Wacom Bamboo, Graphire, Intuos 1+2+3 and Cintiq 1st gen tablet drivers for macOS Catalina, Big Sur, Monterey (including M1 macs)

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inception

INCEpTION provides a semantic annotation platform offering intelligent annotation assistance and knowledge management.

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conceptnet5

Code for building ConceptNet from raw data.

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deeplearning-models

A collection of various deep learning architectures, models, and tips

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decaNLP

The Natural Language Decathlon: A Multitask Challenge for NLP

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