marinebon's repositories
infographiqJS
Infographiq, ie intelligent interactive infographics, core JavaScript library
infographiq
Overview documentation (in bookdown) for creating intelligent interactive infographics, ie infographiq
map-of-activities
MBON Map of Activities
MarineSDMs
Marine Species Distribution Modeling (SDM) Quarto book
dwc-bias-analysis
An analysis of sampling spatial, tempora, and taxonomic biases for Darwin-Core (Dwc) data.
marinebon.github.io
old website for the Marine Biodiversity Observation Network, aka MBON
mbon-dashboard-server
server software for MBON early alert dashboard using Docker
mbon_data_uploader
frontend for uploading mbon data into the mbon-in-a-box stack
py-dwc-viz
Python Package for data analysis and visualisation for Darwin Core data, with plug-and-play from providers like OBIS and GBIF.
www_marinebon2
MBON Website 2021 Rebuild in progress
aquamaps-downscaled
initial attempt to downscale AquaMaps species distribution models to finer spatial resolution a la GEBCO bathymetry (15 arc second)
aquamapsduckdb
Reformatting of aquamapsdata R package with faster duck database and new terra package for rasters
awesome-erddap-datasets
Curated list of datasets available via ERDDAP
bio-idx-wg
MBON Biodiversity Indicators Workin Group -- various outputs, starting with kickoff survey
data-management-checklists
[DRAFT] data management protocol checklists containing recommendations from the MBON Data Management Working Group
data_reports
Quarto reports generated to show status of MBON-mediated datasets.
dataset-registry
Registry of MBON-supported datasets
marinebon_app
docker for marinebon.app
marinebon_org_old_site
Raw html for older (201?-2019) website built using godaddy website builder
open-biodiversity-assessment-pub
WiP Open Biodiversity Assessment Publication
open-biodiversity-indicators
Biodiversity indicators generated using open science methodology and FAIR taxonomic occurrence data.
sdm-explore
Explore species distribution modeling
SLURMquamapR
R scripts to generate aquamaps using SLURM supercomputing scheduler
www_marinebon
Hugo / R blogdown based website for marinebon.org staged at www.marinebon.app
www_marinebon3
Testing latest blogdown with Hugo wowchemy/starter-academic