mareds / r_course

Course on data analysis with R for marine scientists

MAREDS - Data analysis with R

About the course

This is a course taught as part of the curriculum of the Master program MARSYS-MARine EcoSYStem and Fishery Sciences at the Institute of Marine Ecosystem and Fishery Science (IMF), University of Hamburg, Germany.

About the course website and repo

All code (.Rmd) is available in this github repository. Feel free to browse, download, and even contribute by forking.

Source files for the gh-pages doc folder are organized as follows:

• site folder for the global webpages.
• exercises folder for the case studies and exercise demo codes of specific lectures.

To create the html files for the docs folder, use the Build -> Build All button in RStudio. This button will use the rules defined in Makefiles to produce the HTML files. make will use the rmarkdown::render_site() function to create the files in the docs folder.

The lecture presentations were coded using the slidify framework. To render the .Rmd files (not included in this repo) into HTML another function was used (slidify::slidify()) and all output files and any supporting files (in asset, library, data, image and _plotting_files folders) moved manually into the docs folder for gh-pages.