marcus1487

nanoraw

Genome guided re-segmention and visualization for raw nanopore sequencing data.

bedtools2

A powerful toolset for genome arithmetic.

bioconda-recipes

Conda recipes for the bioconda channel.

cowplot

kmer_models

Predictive kmer models for development use

minimap2

A versatile pairwise aligner for genomic and spliced nucleotide sequences

panga

pysam

Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.