marcomusy / cell_density

interactive plot of cell density vs gene expression

Repository from Github https://github.commarcomusy/cell_densityRepository from Github https://github.commarcomusy/cell_density

Compute cell density vs gene expression data

Usage

Install vedo dev:

 pip install -U git+https://github.com/marcomusy/vedo.git

Run:

python analyse_density.py test_image.png test_image_gfp.png

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interactive plot of cell density vs gene expression


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