marcom

Llama.jl

Julia interface to llama.cpp, a C/C++ library for running language models

ViennaRNA.jl

Julia interface to ViennaRNA for RNA structure prediction and analysis

RNAstructure.jl

Julia interface to the RNAstructure program suite for RNA structure prediction and analysis

LinearFold.jl

Julia interface to LinearFold RNA structure prediction programs: LinearFold, LinearPartition, LinearSampling, and LinearTurboFold

BioStockholm.jl

Julia parser for the Stockholm file format (.sto) used for multiple sequence alignments (Pfam, Rfam, etc)

FoldRNA.jl

Nucleic acid secondary structure prediction and analysis

PlotRNA.jl

Plot nucleic acid secondary structures with Julia

DiffFoldRNA.jl

Differentiable RNA partition function and sequence design

dss-opt

Dynamics in sequence space optimisation for RNA sequence design

alen

Simple terminal alignment viewer

BinaryBuilderBase.jl

BinaryBuilder_DssOpt_jll.jl

Julia BinaryBuilder script for building DssOpt_jll

bioconda-recipes

Conda recipes for the bioconda channel.

CassetteOverlay.jl

An experimental simple method overlay mechanism for Julia

DssOpt.jl

Julia interface to dss-opt RNA sequence design programs

DssOpt_jll.jl

Eyeball.jl

Object and type viewer for Julia

fr3d-python

Python implementation of the FR3D software for searching and annotating RNA 3D structures

Infernal.jl

julia

The Julia Programming Language

KMC

Fast and frugal disk based k-mer counter

libcifpp

Library containing code to manipulate mmCIF and PDB files

llama.cpp

Port of Facebook's LLaMA model in C/C++

openfold

Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

PCFGs.jl

Probabilistic Context-Free Grammars in Julia

PkgEval.jl

Keeping tabs on the julia ecosystem

TestDeploy_Windows_DSSP_jll

ViennaRNA

The ViennaRNA Package

WebBlast.jl

Yggdrasil

Collection of builder repositories for BinaryBuilder.jl