Mara Lampert's repositories
Bachelor-Thesis-Repository
Repository of Code used in the Bachelor Thesis "Guanine crystal segmentation and classification imaged in the eye of zebrafish embryos"
BioImageAnalysisNotebooks
Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more
bia-bob
BIA Bob is a Jupyter+LLM-based assistant for interacting with image data and for working on Bio-image Analysis tasks.
blog
Most of us study and work at the Bio-image Analysis Technology Development group at the DFG Cluster of Excellence “Physics of Life” at the TU Dresden. We blog about image data science, knowledge exchange and research data management in the life sciences.
human-eval-bia
Benchmarking Large Language Models for Bio-Image Analysis Code Generation
napari-clusters-plotter-example-notebooks
This repository hosts jupyter notebooks with examples of napari-clusters-plotter usage
napari-skimage-regionprops
Feature extraction for labeled objects in images using regionprops from scikit-image
stackview
Interactive image stack viewing in jupyter notebooks based on ipycanvas and ipywidgets