Altan Orhon's repositories
hyakvnc_apptainer
Sample VNC Apptainers for use on UW Hyak
quarto-popover-glossary
A lua extension that provides shortcodes for a pop-up glossary in quarto.
slurm-submit-to-multiple
Submit a job to multiple SLURM partitions
_apptainer-actions
GitHub Actions for Apptainer
apptainer-actions
GitHub Actions for building and publishing Apptainer containers.
apptainer.lang
Syntaxes and formatters for Apptainer/Singularity recipes supporting several text editors
cloudknot
A python library to run your existing code on AWS Batch
compute_docs_examples
Example code for University of Washington's Department of Psychology's documentation on computational resources and best practices for researchers.
github-action-apptainer-install
GitHub Action to install Apptainer
sleap-container
Container for SLEAP
test-apptainer-gh
Testing Apptainer container builds via GitHub Actions
asdf-gitwatch
gitwatch plugin for asdf
bids2table
Efficiently index large-scale BIDS neuroimaging datasets and derivatives
dhcp-structural-pipeline
structural analysis of neonatal brain MRI scans
help2comp
Plugin that generates completion functions automatically from getopt-style help texts
infantfreesurfer-singularity
infantfreesurfer on Singularity
klone-lmods
Lmod modules for Klone
LLaVA
[NeurIPS'23 Oral] Visual Instruction Tuning (LLaVA) built towards GPT-4V level capabilities and beyond.
pure-bash-bible
📖 A collection of pure bash alternatives to external processes.
pure-sh-bible
📖 A collection of pure POSIX sh alternatives to external processes.
pybids
Python tools for querying and manipulating BIDS datasets.
qsiprep
Preprocessing and reconstruction of diffusion MRI
restic
Fast, secure, efficient backup program
vscode-apptainer
Syntax highlighting for Apptainer/Singularity definition files in Visual Studio Code with embedded shell script highlighting.
workbench
Connectome Workbench