mandadapu-group / active-matter

Simulation and analysis code for active matter research

Molecular Simulations of Active Matter

Simulation and analysis code for active matter research.

To run simulations of the chiral active dumbbell fluid described in [C. Hargus, K. Klymko, J. M. Epstein and K. K. Mandadapu arXiv:2002.10437 (2020)], you should

1. Download LAMMPS from https://lammps.sandia.gov/
2. Add the custom source and header files contained in this repository (in ./src) to the LAMMPS src directory (e.g. /path/to/lammps/src)
3. Compile LAMMPS following instructions at https://lammps.sandia.gov/
4. Invoke the lmp binary on a script from ./scripts. For example, mpirun -np 24 lmp -in poiseuille.in