bart-tutorials
Suite of tutorials for BART: Berkeley Advanced Reconstruction Toolbox, an open-source library for advanced computational MRI and Image Reconstruction
Running Locally
-
These notebooks function best with a handful of jupyter notebook extensions. Run
pip install -r requirements.txt
to install them. Runstartup.sh
to configure necessary extensions. -
Make sure your PATH is configured to find BART. If you get an error when running
bart
from the command line after installing a release from GitHub, runexport PATH=/path/to/bart:$PATH
with your respective path to BART. Additionally, you can runapt-get install bart
on Ubuntu/Debian orbrew install bart
on OS X.
Running from Binder
The following Binder allows you to run BART code directly in your browser! Note that anything involving View - the open-source image viewer for BART - does not currently work in Binder.