Maize Genetics's repositories
bioinformatic_scripts
Bioinformatic Scripts written in Kotlin Script, Python, R, etc. that may use BioKotlin, TASSEL 5, TASSEL 6, PHG, etc. as dependencies
breeder-notebook
A Jupyter Docker Stack for Plant Scientists and Breeders
biokotlin-tools
Command line tools related to BioKotlin
breeder-genomics-hub
The Breeder Genomics Hub is a batteries-included JupyterHub distribution for breeders (Pangeo for plant scientists)
Field-Book
Field Book
kotlin-compiler-server
Server for executing kotlin code
kotlin-jupyter-libraries
Library descriptors for Kotlin kernel for Jupyter
maize-genetics.github.io
Deployment site for test code
rTASSEL_sandbox
rTASSEL sandbox environment using Binder
commonbean-phg-v2
Scripts and notes for building a common bean PHG using v2 architecture
hubtools
Utility functions designed for R notebooks within the Breeder's Genomics Hub
msaR
The BioJS MSA viewer wrapped into an R package
reelGeneShiny
Shiny App from the hackathon of reelGene scores and other data