mackerman44

telemetyr

An R package for processing telemetry observation data.

mra_hsi

HSI analysis for MRA reporting

SCOBI

Salmonid COmposition Bootstrap Intervals

AbundanceEstimationInR

champ_Q4s

An assessment of sites in the CHaMP database containing high densities (4th quartile) and habitat covariates that might explain the high observed densities.

DABOM

Dam Adult Branch Occupancy Model

deadwateR

An assessment of predation on juvenile salmonids in the Deadwater Reach of the Salmon River, Idaho

DeadwaterPaper

A repo containing data, code, and associated materials for a manuscript on predator abundance in Deadwater Slough and potential impacts to local Chinook salmon

escapeLGD

Escapement Estimation at Lower Granite Dam

ETN_workshop_Jan2021

gitPlay

My GitHub repository for playing around

fisheR

Extract fish data from various Columbia basin data repositories.

idfgen

Import, Manipulate, and Export Genotype Data

LGR_pHOS_Sim

An R project to evaluate PIT tagging sample sizes (or rates) necessary to estimate pHOS with acceptable accuracy and precision.

lowergranite

assessing precision and accuracy of spawning run estimates

mra_fish_n_hydro

Examine juvenile Chinook salmon fry emergence and presmolt emigration timing as it relates to the hydrograph in the Lemhi River

mra_lemhi_juv_obs

Lessons learned and findings from several years of juvenile fish sampling in the Lemhi River, Idaho. Compiled as part of the Upper Salmon MRA effort.

PITcleanr

Compress PIT tag capture histories for use in various analyses

PWOP-vs-SA

comparing two methods of Ne estimation

recipes

A place to render family recipes: https://githubschool.github.io/recipes

RSP

Refining the Shortest Paths (RSP) of animals tracked with acoustic transmitters in estuarine regions

simNsamp

Simple Simulation and Sampling

STADEM

Estimate escapment across a dam

stockCIs

Bootstrapping for CIs of Fish Stocks

upper_salmon_introgression

Evaluation of introgression of coastal and redband O. mykiss in the Lemhi and Pahsimeroi rivers

wRigley

Baseball data analysis in R