Guerrino Macori's repositories
cloud-genomics
Introduction to Cloud Computing for Genomics
NAuRA
Nice Automatic Research of Alleles
NGS-workshop-Stellenbosch
Advanced Applications of Next Generation Sequencing in Food Safety Scientific Programme
nle_database
nle_database non-LEE-encoded effector (nle) gene sequences McCarthy SC, Macori G. The database contains non-LEE-encoded effector (nle) gene sequences that can be used for predicting the presence of these genes on genomic sequences of Enteropathogenic Escherichia coli (EPEC).
SEDv
Database of staphylococcal enterotoxins and their variants
Staphylococcus_-SaPIs
Degenetic data on SaPIs, mobile elements in S. aureus influencing bacterial virulence.
Staphylococcus_Plasmids
Database of plasmids carrying out genes for Staphylococcus enterotoxins
UCSanDiegoBioinformaticsI
Scripts written for the "Finding Hidden Messages in DNA (Bioinformatics I)" course offered by UCSanDiego on Coursera.org
Unicycler
hybrid assembly pipeline for bacterial genomes