m-reuter / openMorph

Curated list of open-access databases with human structural MRI data

openMorph

Curated list of open-access databases with human structural MRI data.

Feel free to make additions/updates via pull requests!

IXI

• Information eXtraction from Images
• http://brain-development.org/ixi-dataset/
  • lifespan

OASIS cross-sectional

• Open Access Series of Imaging Studies
• http://www.oasis-brains.org
  • N=416
  • lifespan; dementia; test-retest
• Marcus et al. (2007) J Cogn Neurosci [10.1162/jocn.2007.19.9.1498]

OASIS longitudinal

• Open Access Series of Imaging Studies
• http://www.oasis-brains.org
  • N=150
  • older adults; longitudinal; dementia
• Marcus et al. (2010) J Cogn Neurosci [10.1162/jocn.2009.21407]

HCP

• Human Connectome Project
• http://www.humanconnectomeproject.org
  • N=1200
  • young adults; behavior
• Van Essen et al. (2013) NeuroImage [10.1016/j.neuroimage.2013.05.041]
• Glasser et al. (2016) Nat Neurosci [10.1038/nn.4361]

GSP

• Brain Genome Superstruct Project
• http://neuroinformatics.harvard.edu/gsp/
  • N=1570
  • young adults; test-retest; behavior
• Holmes et al. (2015) Sci Data [10.1038/sdata.2015.31]

NKIRS

• Nathan Kline Institute - Rockland Sample
• http://fcon_1000.projects.nitrc.org/indi/enhanced/
  • developmental; lifespan; behavior
• Nooner et al. (2012) [10.3389/fnins.2012.00152]

CoRR

• Consortium for Reliability and Reproducibility
• http://fcon_1000.projects.nitrc.org/indi/CoRR/html/
  • N=1629
  • young adults; test-retest
• Zuo et al. (2014) Sci Data [10.1038/sdata.2014.49]

ABIDE

• Autism Brain Imaging Data Exchange
• http://fcon_1000.projects.nitrc.org/indi/abide/
  • N=1112
  • developmental; autism
• Di Martino et al. (2014) Mol Psychiatry [10.1038/mp.2013.78]

ADHD-200

• http://fcon_1000.projects.nitrc.org/indi/adhd200/
  • N=973
  • developmental; ADHD
• ADHD-200 Consortium (2012) Front Syst Neurosci [10.3389/fnsys.2012.00062]
• Bellec et al. (2017) NeuroImage [10.1016/j.neuroimage.2016.06.034]

PING

• Pediatric Imaging, Neurocognition, and Genetics
• http://pingstudy.ucsd.edu
  • N=1493
  • developmental; behavior
• Jernigan et al. (2016) NeuroImage [10.1016/j.neuroimage.2015.04.057]

PNC

• Philadelphia Neurodevelopmental Cohort
• https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000607.v2.p2
  • N=1445
  • developmental
• Satterthwaite et al. (2014) NeuroImage [10.1016/j.neuroimage.2013.07.064]
• Satterthwaite et al. (2016) NeuroImage [10.1016/j.neuroimage.2015.03.056]

CamCAN

• Cambridge Centre for Ageing and Neuroscience
• https://camcan-archive.mrc-cbu.cam.ac.uk/dataaccess/
  • N=653
  • lifespan; behavior
• Shafto et al. (2014) BMC Neurol [10.1186/s12883-014-0204-1]
• Taylor et al. (2017) NeuroImage [10.1016/j.neuroimage.2015.09.018]

ADNI

• Alzheimer’s Disease Neuroimaging Initiative
• http://adni.loni.usc.edu
  • older adults; dementia; longitudinal
• Mueller et al. (2005) Alzheimers Dement [10.1016/j.jalz.2005.06.003]
• Jack et al. (2008) J Magn Reson Imaging [10.1002/jmri.21049]

AIBL

• Australian Imaging, Biomarkers and Lifestyle
• http://www.aibl.csiro.au/
  • N=1100
  • older adults; dementia; longitudinal
• Ellis et al. (2009) Int Psychogeriatr [10.1017/S1041610209009405]

COBRE

• Center for Biomedical Research Excellence
• http://cobre.mrn.org
  • schizophrenia

fBIRN

• Function Biomedical Informatics Research Network
• http://www.birncommunity.org
  • schizophrenia; test-retest; traveling subjects
• Keator et al. (2016) NeuroImage [10.1016/j.neuroimage.2015.09.003]

UK Biobank

• http://imaging.ukbiobank.ac.uk
  • N>10,000 (target=100,000)
  • lifespan; behavior; health
• Miller et al. (2016) [10.1038/nn.4393]
• Alfaro-Almagro et al. (2016) [10.1101/130385]

SchizConnect

• http://schizconnect.org
  • schizophrenia
• Wang et al. (2016) NeuroImage [10.1016/j.neuroimage.2015.06.065]

DLBS

• Dallas Lifespan Brain Study
• http://fcon_1000.projects.nitrc.org/indi/retro/dlbs.html
  • N=315
  • lifespan; behavior

BRAINS

• Brain Images of Normal Subjects
• http://www.brainsimagebank.ac.uk
  • lifespan
• Job et al. (2017) NeuroImage [10.1016/j.neuroimage.2016.01.027]

NACC

• National Alzheimer's Coordinating Center
• https://www.alz.washington.edu
  • lifespan; dementia; longitudinal
• Morris et al. (2006) [10.1097/01.wad.0000213865.09806.92]

OpenfMRI

• https://www.openfmri.org
  • 65 datasets (and counting)
  • 2256 subjects (and counting)
• Please see individual dataset page for papers to cite

MASSIVE

• Multiple Acquisitions for Standardization of Structural Imaging Validation and Evaluation
• http://massive-data.org/index.html
  • N=1
  • multiple dMRI aquisitions
• Froeling et al. (2016) [10.1002/mrm.26259]

Test-Retest Reliability of Brain Volume Measurements

• https://figshare.com/collections/Test_Retest_Reliability_of_Brain_Volume_Measurements/929651
  • N=3
  • each scanned 40 times, within 31 days
• MacLaren et al. (2014) [10.1038/sdata.2014.37]

Kirby 21

• http://www.nitrc.org/projects/multimodal
  • N=21
  • test-retest
• Landman et al. (2011) [10.1016/j.neuroimage.2010.11.047]

Age-ility

• http://www.nitrc.org/projects/age-ility/
  • N=131
  • T1w, dMRI, rsMRI, EEG
• Karayanidis et al. (2016) [10.1016/j.neuroimage.2015.04.047]

PTBP

• The Pediatric Template of Brain Perfusion
• https://figshare.com/articles/PTBP_Nifti/1190933
  • N=210
  • T1w, dMRI, rsMRI, ASL
• Avants et al. (2015) [10.1038/sdata.2015.3]

MIRIAD

• Minimal Interval Resonance Imaging in Alzheimer's Disease
• https://www.ucl.ac.uk/drc/research/methods/miriad-scan-database
  • N=69
  • longitudinal
• Malone et al. (2013) [10.1016/j.neuroimage.2012.12.044]

studyforrest.org

• http://studyforrest.org/
  • N=20
  • T1w, T2w, dMRI, SWI, Angiography
  • up to 10+ hours of 7T and 3T fMRI per subject (2h hollywood movie [audio and/or audio-visual], localizers, retinotopic mapping, with simult. cardiac/resp, partially with simult. eyetracking)
    • extensive movie stimulus annotations
  • musical education, visual acuity, visual sensitivity
• Hanke et al. (2014) [10.1038/sdata.2014.3]