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Lozupone Lab (lozuponelab)

Lozupone Lab

lozuponelab

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We combine bioinformatics and experimental work to understand the driving factors of human microbiota composition in health and disease.​

Location:Anschutz Medical Campus at UC Denver

Home Page:http://www.ucdenver.edu/academics/colleges/medicalschool/departments/medicine/BIPM/Lozupone%20Lab/Pages/Lozupone%20Lab.aspx

Twitter:@lozuponelab

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Lozupone Lab's repositories

SCNIC

Sparse Cooccurence Network Investigation for Compositional data

Language:PythonLicense:BSD-3-ClauseStargazers:22Issues:4Issues:15

AMON

Annotation of Metabolite Origin via Networks: A tool for predicting putative metabolite origins for microbes or between microbes and host with or without metabolomics data

Language:PythonLicense:MITStargazers:21Issues:7Issues:10

q2-SCNIC

A QIIME2 plugin for running SCNIC

Language:PythonLicense:BSD-3-ClauseStargazers:4Issues:4Issues:10

knowledge-source-mappings

Language:RStargazers:1Issues:6Issues:0

Source_of_Fecal_and_Oral_Bacteria_on_Hands

A repository containing data, methods and results for the manuscript The Prevalence and Source of Fecal and Oral Bacteria on Infant, Child and Adult Hands.

Language:Jupyter NotebookLicense:GPL-3.0Stargazers:1Issues:4Issues:0

KEGG_parser

KEGG Parsers, extracted and refactored

Language:PythonLicense:MITStargazers:0Issues:6Issues:4

q2-amon

Qiime 2 plugin for AMON

License:MITStargazers:0Issues:4Issues:0

seq-helper-scripts

Helper scripts for working with sequencing data (16S, MetaG, or MetaT)

Language:PythonStargazers:0Issues:6Issues:0