Loukas Theodosiou's repositories
ggvolc
𝐠𝐠𝐯𝐨𝐥𝐜 effortlessly translates differential expression datasets and RNAseq data into informative volcano plots. Highlight genes of interest with unprecedented ease. With just a single line of code, visualize complex datasets, gaining deeper insights and simplifying data representation
ltc_palettes
"ltc_palettes: Tailored for data visualization enthusiasts, ltc_palettes is an R package that offers a curated collection of color palettes. Crafted to enhance clarity and impact, these palettes ensure that your visual representations not only communicate data effectively but also aesthetically
barcosim
BarcoSim, a specialized R package designed for simulating barcoded amplicon sequences. Whether you're testing algorithms or forecasting experimental outcomes, BarcoSim provides a robust framework to mimic real-world sequencing scenarios, ensuring preparedness and enhancing the efficiency of your genomic projects."
30-Days-Of-JavaScript
30 days of JavaScript programming challenge is a step-by-step guide to learn JavaScript programming language in 30 days. This challenge may take more than 100 days, please just follow your own pace.
bamstats_app
bamstats is a user-friendly Shiny application designed to visualize and analyze coverage data from BAM (Binary Alignment/Map) files across specific genes. This app provides an intuitive interface for exploring and understanding the coverage patterns within genes, enabling researchers to identify potential issues or regions of interest.
barbac
𝐛𝐚𝐫𝐛𝐚𝐜 is an R package designed for the 𝘦𝘹𝘵𝘳𝘢𝘤𝘵𝘪𝘰𝘯 of barcode sequences. It efficiently 𝘤𝘭𝘶𝘴𝘵𝘦𝘳𝘴 these sequences and provides functionality for the calculation and visualization of 𝘵𝘪𝘮𝘦 𝘴𝘦𝘳𝘪𝘦𝘴 trajectories of the barcoded data.
Best-README-Template
An awesome README template to jumpstart your projects!
g3
A developmental version of a graph to compare genomes
gRate
An R package for calculating r and K from growth curves
learning_bam_file
Learning the Sequence Alignment/Map format
snpless-nf
snpless-nf - A Nextflow pipeline for time-course analysis with bacterial NGS whole-genome data.
testing_datasets
How many times you have thought that you need a small dataset for testing purposes?